Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm2810-201ENSMUST00000118681 990 ntBASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Gm29741-201ENSMUST00000192667 421 ntBASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.51□□□□□ -0.41
Trim13Q9CYB0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim13Q9CYB0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Gm13823-201ENSMUST00000119930 345 ntBASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim13Q9CYB0 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim13Q9CYB0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim13Q9CYB0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trim13Q9CYB0 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.49□□□□□ -0.41
Trim13Q9CYB0 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim13Q9CYB0 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim13Q9CYB0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim13Q9CYB0 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trim13Q9CYB0 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim13Q9CYB0 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim13Q9CYB0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim13Q9CYB0 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trim13Q9CYB0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim13Q9CYB0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim13Q9CYB0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim13Q9CYB0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim13Q9CYB0 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim13Q9CYB0 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim13Q9CYB0 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim13Q9CYB0 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trim13Q9CYB0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim13Q9CYB0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.49□□□□□ -0.41
Trim13Q9CYB0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim13Q9CYB0 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.49□□□□□ -0.41
Trim13Q9CYB0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim13Q9CYB0 Mir3113-201ENSMUST00000175478 76 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms