Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn1Q9CWM4 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pfdn1Q9CWM4 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.84□□□□□ -0.51
Pfdn1Q9CWM4 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pfdn1Q9CWM4 Gm13559-201ENSMUST00000120476 863 ntBASIC11.84□□□□□ -0.51
Pfdn1Q9CWM4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.84□□□□□ -0.51
Pfdn1Q9CWM4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn1Q9CWM4 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Pfdn1Q9CWM4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn1Q9CWM4 Gm7889-201ENSMUST00000185591 958 ntBASIC11.84□□□□□ -0.51
Pfdn1Q9CWM4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.84□□□□□ -0.51
Pfdn1Q9CWM4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn1Q9CWM4 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Pfdn1Q9CWM4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn1Q9CWM4 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn1Q9CWM4 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn1Q9CWM4 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn1Q9CWM4 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn1Q9CWM4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn1Q9CWM4 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn1Q9CWM4 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn1Q9CWM4 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn1Q9CWM4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Pfdn1Q9CWM4 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn1Q9CWM4 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Pfdn1Q9CWM4 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Pfdn1Q9CWM4 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Pfdn1Q9CWM4 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
Pfdn1Q9CWM4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Gm20472-201ENSMUST00000174403 1240 ntBASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn1Q9CWM4 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Olfr286-202ENSMUST00000205305 969 ntBASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pfdn1Q9CWM4 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms