Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smc1aQ9CU62 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc1aQ9CU62 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc1aQ9CU62 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Smc1aQ9CU62 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC15.18■□□□□ 0.02
Smc1aQ9CU62 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc1aQ9CU62 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc1aQ9CU62 AA619741-201ENSMUST00000195095 646 ntBASIC15.18■□□□□ 0.02
Smc1aQ9CU62 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.18■□□□□ 0.02
Smc1aQ9CU62 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc1aQ9CU62 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc1aQ9CU62 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc1aQ9CU62 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.18■□□□□ 0.02
Smc1aQ9CU62 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc1aQ9CU62 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc1aQ9CU62 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc1aQ9CU62 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc1aQ9CU62 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc1aQ9CU62 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Smc1aQ9CU62 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Gm21854-201ENSMUST00000179901 471 ntBASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Gm10766-202ENSMUST00000194123 606 ntBASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Gm25857-201ENSMUST00000082788 129 ntBASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Gm42829-201ENSMUST00000198417 2585 ntBASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Ntrk2-204ENSMUST00000224259 3049 ntBASIC15.17■□□□□ 0.02
Smc1aQ9CU62 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Smc1aQ9CU62 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc1aQ9CU62 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc1aQ9CU62 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Smc1aQ9CU62 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc1aQ9CU62 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.16■□□□□ 0.02
Smc1aQ9CU62 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smc1aQ9CU62 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.16■□□□□ 0.02
Smc1aQ9CU62 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.16■□□□□ 0.02
Smc1aQ9CU62 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smc1aQ9CU62 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Smc1aQ9CU62 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Smc1aQ9CU62 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc1aQ9CU62 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc1aQ9CU62 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.16■□□□□ 0.02
Smc1aQ9CU62 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smc1aQ9CU62 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smc1aQ9CU62 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc1aQ9CU62 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc1aQ9CU62 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Smc1aQ9CU62 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc1aQ9CU62 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc1aQ9CU62 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc1aQ9CU62 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.16■□□□□ 0.02
Smc1aQ9CU62 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Smc1aQ9CU62 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Smc1aQ9CU62 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smc1aQ9CU62 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smc1aQ9CU62 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc1aQ9CU62 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc1aQ9CU62 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc1aQ9CU62 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc1aQ9CU62 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc1aQ9CU62 Mypopos-202ENSMUST00000205975 2321 ntBASIC15.15■□□□□ 0.02
Smc1aQ9CU62 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc1aQ9CU62 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc1aQ9CU62 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc1aQ9CU62 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc1aQ9CU62 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc1aQ9CU62 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc1aQ9CU62 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc1aQ9CU62 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.15■□□□□ 0.02
Smc1aQ9CU62 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smc1aQ9CU62 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.15■□□□□ 0.02
Smc1aQ9CU62 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.15■□□□□ 0.02
Smc1aQ9CU62 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc1aQ9CU62 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.15■□□□□ 0.02
Smc1aQ9CU62 Gm18624-201ENSMUST00000220966 658 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms