Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Gm10766-202ENSMUST00000194123 606 ntBASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Gm8515-201ENSMUST00000194852 576 ntBASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Gm9794-201ENSMUST00000202370 423 ntBASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sft2d3Q9CSV6 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Gm14928-201ENSMUST00000120198 477 ntBASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Gm37917-201ENSMUST00000194711 392 ntBASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sft2d3Q9CSV6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.55□□□□□ -0.56
Sft2d3Q9CSV6 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.55□□□□□ -0.56
Sft2d3Q9CSV6 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Sft2d3Q9CSV6 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Sft2d3Q9CSV6 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sft2d3Q9CSV6 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sft2d3Q9CSV6 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sft2d3Q9CSV6 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sft2d3Q9CSV6 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sft2d3Q9CSV6 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sft2d3Q9CSV6 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.55□□□□□ -0.56
Sft2d3Q9CSV6 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sft2d3Q9CSV6 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Sft2d3Q9CSV6 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Sft2d3Q9CSV6 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Sft2d3Q9CSV6 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.55□□□□□ -0.56
Sft2d3Q9CSV6 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.55□□□□□ -0.56
Sft2d3Q9CSV6 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Sft2d3Q9CSV6 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.55□□□□□ -0.56
Sft2d3Q9CSV6 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Sft2d3Q9CSV6 Gm18018-201ENSMUST00000198273 408 ntBASIC11.55□□□□□ -0.56
Sft2d3Q9CSV6 Gm7653-201ENSMUST00000214567 508 ntBASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms