Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm14277-201ENSMUST00000121195 360 ntBASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Gm8738-201ENSMUST00000172606 329 ntBASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Mir5120-201ENSMUST00000175020 78 ntBASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Gm26956-201ENSMUST00000182176 986 ntBASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Gm31256-201ENSMUST00000194705 506 ntBASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Gm19208-201ENSMUST00000213861 912 ntBASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cldnd1Q9CQX5 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Cldnd1Q9CQX5 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cldnd1Q9CQX5 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cldnd1Q9CQX5 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Gm42997-202ENSMUST00000200321 985 ntBASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cldnd1Q9CQX5 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Gm11439-201ENSMUST00000118598 409 ntBASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Gm4909-201ENSMUST00000118749 794 ntBASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Gm37042-201ENSMUST00000193816 581 ntBASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cldnd1Q9CQX5 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms