Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rpa3Q9CQ71 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa3Q9CQ71 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.32□□□□□ -0.12
Rpa3Q9CQ71 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.32□□□□□ -0.12
Rpa3Q9CQ71 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.32□□□□□ -0.12
Rpa3Q9CQ71 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa3Q9CQ71 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Rpa3Q9CQ71 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa3Q9CQ71 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa3Q9CQ71 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.32□□□□□ -0.12
Rpa3Q9CQ71 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpa3Q9CQ71 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Gm11524-201ENSMUST00000119349 807 ntBASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Gm28631-201ENSMUST00000190740 334 ntBASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Gm19078-201ENSMUST00000206311 727 ntBASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa3Q9CQ71 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.29□□□□□ -0.12
Rpa3Q9CQ71 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms