Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gtf2a1Q99PM3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gtf2a1Q99PM3 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gtf2a1Q99PM3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gtf2a1Q99PM3 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gtf2a1Q99PM3 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gtf2a1Q99PM3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gtf2a1Q99PM3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Gtf2a1Q99PM3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gtf2a1Q99PM3 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gtf2a1Q99PM3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.79□□□□□ -0.04
Gtf2a1Q99PM3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.79□□□□□ -0.04
Gtf2a1Q99PM3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gtf2a1Q99PM3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Gtf2a1Q99PM3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gtf2a1Q99PM3 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gtf2a1Q99PM3 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gtf2a1Q99PM3 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gtf2a1Q99PM3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gtf2a1Q99PM3 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gtf2a1Q99PM3 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gtf2a1Q99PM3 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gtf2a1Q99PM3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.78□□□□□ -0.04
Gtf2a1Q99PM3 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gtf2a1Q99PM3 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC14.77□□□□□ -0.04
Gtf2a1Q99PM3 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gtf2a1Q99PM3 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gtf2a1Q99PM3 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.77□□□□□ -0.04
Gtf2a1Q99PM3 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gtf2a1Q99PM3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.77□□□□□ -0.04
Gtf2a1Q99PM3 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gtf2a1Q99PM3 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gtf2a1Q99PM3 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Gtf2a1Q99PM3 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gtf2a1Q99PM3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gtf2a1Q99PM3 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Gtf2a1Q99PM3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gtf2a1Q99PM3 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Gtf2a1Q99PM3 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Gtf2a1Q99PM3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.77□□□□□ -0.05
Gtf2a1Q99PM3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gtf2a1Q99PM3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Gtf2a1Q99PM3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gtf2a1Q99PM3 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Gtf2a1Q99PM3 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Gtf2a1Q99PM3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gtf2a1Q99PM3 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Gtf2a1Q99PM3 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Gtf2a1Q99PM3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Gtf2a1Q99PM3 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gtf2a1Q99PM3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Gtf2a1Q99PM3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.77□□□□□ -0.05
Gtf2a1Q99PM3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gtf2a1Q99PM3 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2a1Q99PM3 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2a1Q99PM3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2a1Q99PM3 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.76□□□□□ -0.05
Gtf2a1Q99PM3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2a1Q99PM3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2a1Q99PM3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2a1Q99PM3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
Gtf2a1Q99PM3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Gtf2a1Q99PM3 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Gtf2a1Q99PM3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2a1Q99PM3 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2a1Q99PM3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gtf2a1Q99PM3 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms