Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SncaipQ99ME3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SncaipQ99ME3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14□□□□□ -0.17
SncaipQ99ME3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SncaipQ99ME3 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SncaipQ99ME3 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
SncaipQ99ME3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SncaipQ99ME3 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Gm5866-201ENSMUST00000177881 973 ntBASIC13.99□□□□□ -0.17
SncaipQ99ME3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SncaipQ99ME3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Gm43094-201ENSMUST00000196549 921 ntBASIC13.99□□□□□ -0.17
SncaipQ99ME3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaipQ99ME3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaipQ99ME3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaipQ99ME3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SncaipQ99ME3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaipQ99ME3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaipQ99ME3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SncaipQ99ME3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaipQ99ME3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
SncaipQ99ME3 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.98□□□□□ -0.17
SncaipQ99ME3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaipQ99ME3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SncaipQ99ME3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SncaipQ99ME3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaipQ99ME3 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaipQ99ME3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaipQ99ME3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaipQ99ME3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SncaipQ99ME3 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
SncaipQ99ME3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaipQ99ME3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaipQ99ME3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaipQ99ME3 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaipQ99ME3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SncaipQ99ME3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaipQ99ME3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SncaipQ99ME3 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaipQ99ME3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SncaipQ99ME3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SncaipQ99ME3 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaipQ99ME3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SncaipQ99ME3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaipQ99ME3 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.97□□□□□ -0.17
SncaipQ99ME3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaipQ99ME3 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaipQ99ME3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaipQ99ME3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
SncaipQ99ME3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
SncaipQ99ME3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SncaipQ99ME3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SncaipQ99ME3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SncaipQ99ME3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaipQ99ME3 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaipQ99ME3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.97□□□□□ -0.17
SncaipQ99ME3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaipQ99ME3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SncaipQ99ME3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SncaipQ99ME3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SncaipQ99ME3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SncaipQ99ME3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SncaipQ99ME3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.97□□□□□ -0.17
SncaipQ99ME3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SncaipQ99ME3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms