Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Scrt1Q99M85 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.87□□□□□ -0.51
Scrt1Q99M85 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Gm16177-201ENSMUST00000120728 718 ntBASIC11.87□□□□□ -0.51
Scrt1Q99M85 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.87□□□□□ -0.51
Scrt1Q99M85 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Gm7584-201ENSMUST00000175829 940 ntBASIC11.87□□□□□ -0.51
Scrt1Q99M85 Gm27514-201ENSMUST00000183692 110 ntBASIC11.87□□□□□ -0.51
Scrt1Q99M85 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.87□□□□□ -0.51
Scrt1Q99M85 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scrt1Q99M85 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.87□□□□□ -0.51
Scrt1Q99M85 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.86□□□□□ -0.51
Scrt1Q99M85 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Gm24644-201ENSMUST00000157114 139 ntBASIC11.86□□□□□ -0.51
Scrt1Q99M85 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Scrt1Q99M85 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Gm37714-201ENSMUST00000194742 342 ntBASIC11.86□□□□□ -0.51
Scrt1Q99M85 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.86□□□□□ -0.51
Scrt1Q99M85 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.86□□□□□ -0.51
Scrt1Q99M85 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.86□□□□□ -0.51
Scrt1Q99M85 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.86□□□□□ -0.51
Scrt1Q99M85 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms