Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk5rap3Q99LM2 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Gm10766-202ENSMUST00000194123 606 ntBASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk5rap3Q99LM2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Gm2213-201ENSMUST00000197485 688 ntBASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cdk5rap3Q99LM2 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk5rap3Q99LM2 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cdk5rap3Q99LM2 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.02□□□□□ -0.16
Cdk5rap3Q99LM2 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk5rap3Q99LM2 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cdk5rap3Q99LM2 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk5rap3Q99LM2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cdk5rap3Q99LM2 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk5rap3Q99LM2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk5rap3Q99LM2 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk5rap3Q99LM2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk5rap3Q99LM2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk5rap3Q99LM2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk5rap3Q99LM2 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk5rap3Q99LM2 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk5rap3Q99LM2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cdk5rap3Q99LM2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 Gm12585-201ENSMUST00000117307 290 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms