Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.21□□□□□ -0.13
Clp1Q99LI9 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clp1Q99LI9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clp1Q99LI9 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clp1Q99LI9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clp1Q99LI9 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Clp1Q99LI9 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Clp1Q99LI9 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Clp1Q99LI9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clp1Q99LI9 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clp1Q99LI9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Clp1Q99LI9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Clp1Q99LI9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clp1Q99LI9 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Gm18584-201ENSMUST00000203098 964 ntBASIC14.2□□□□□ -0.14
Clp1Q99LI9 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clp1Q99LI9 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.2□□□□□ -0.14
Clp1Q99LI9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clp1Q99LI9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clp1Q99LI9 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.19□□□□□ -0.14
Clp1Q99LI9 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clp1Q99LI9 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Gm5363-201ENSMUST00000211927 938 ntBASIC14.19□□□□□ -0.14
Clp1Q99LI9 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.19□□□□□ -0.14
Clp1Q99LI9 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Clp1Q99LI9 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clp1Q99LI9 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clp1Q99LI9 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clp1Q99LI9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Clp1Q99LI9 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clp1Q99LI9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clp1Q99LI9 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.18□□□□□ -0.14
Clp1Q99LI9 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clp1Q99LI9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clp1Q99LI9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clp1Q99LI9 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clp1Q99LI9 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clp1Q99LI9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clp1Q99LI9 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clp1Q99LI9 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.18□□□□□ -0.14
Clp1Q99LI9 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.18□□□□□ -0.14
Clp1Q99LI9 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.18□□□□□ -0.14
Clp1Q99LI9 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clp1Q99LI9 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms