Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lysmd3Q99LE3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lysmd3Q99LE3 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Lysmd3Q99LE3 Gm17794-201ENSMUST00000220252 955 ntBASIC14.04□□□□□ -0.16
Lysmd3Q99LE3 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.04□□□□□ -0.16
Lysmd3Q99LE3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lysmd3Q99LE3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lysmd3Q99LE3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lysmd3Q99LE3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lysmd3Q99LE3 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lysmd3Q99LE3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Lysmd3Q99LE3 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.04□□□□□ -0.16
Lysmd3Q99LE3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Lysmd3Q99LE3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.04□□□□□ -0.16
Lysmd3Q99LE3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lysmd3Q99LE3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lysmd3Q99LE3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lysmd3Q99LE3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Gm14127-201ENSMUST00000117906 678 ntBASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Gm17150-201ENSMUST00000165577 381 ntBASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Lysmd3Q99LE3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Lysmd3Q99LE3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
Lysmd3Q99LE3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Lysmd3Q99LE3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lysmd3Q99LE3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lysmd3Q99LE3 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
Lysmd3Q99LE3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.02□□□□□ -0.16
Lysmd3Q99LE3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lysmd3Q99LE3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lysmd3Q99LE3 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Lysmd3Q99LE3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Lysmd3Q99LE3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.02□□□□□ -0.16
Lysmd3Q99LE3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Lysmd3Q99LE3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Lysmd3Q99LE3 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.02□□□□□ -0.16
Lysmd3Q99LE3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.02□□□□□ -0.16
Lysmd3Q99LE3 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lysmd3Q99LE3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms