Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga11Q91XY8 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Gm14767-201ENSMUST00000121559 586 ntBASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Gm10766-202ENSMUST00000194123 606 ntBASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga11Q91XY8 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Pck2-205ENSMUST00000226352 2784 ntBASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Gm13223-201ENSMUST00000118609 747 ntBASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Gm13453-201ENSMUST00000118708 357 ntBASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Gm8927-201ENSMUST00000181978 981 ntBASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Gm3222-201ENSMUST00000071282 990 ntBASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga11Q91XY8 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms