Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Gm17150-201ENSMUST00000165577 381 ntBASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Gm8927-201ENSMUST00000181978 981 ntBASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Gm43094-201ENSMUST00000196549 921 ntBASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Gm3222-201ENSMUST00000071282 990 ntBASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Gm19078-201ENSMUST00000206311 727 ntBASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ddx41Q91VN6 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx41Q91VN6 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx41Q91VN6 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx41Q91VN6 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx41Q91VN6 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx41Q91VN6 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx41Q91VN6 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.52■□□□□ 0.08
Ddx41Q91VN6 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx41Q91VN6 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms