Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Gm9063-201ENSMUST00000223299 582 ntBASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Grk6-205ENSMUST00000224653 2976 ntBASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H1fooQ8VIK3 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Mir6956-201ENSMUST00000183598 62 ntBASIC11.34□□□□□ -0.59
H1fooQ8VIK3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H1fooQ8VIK3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms