Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdh18Q8VHR0 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh18Q8VHR0 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh18Q8VHR0 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Gm11745-201ENSMUST00000121669 448 ntBASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Gm12882-201ENSMUST00000121696 517 ntBASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Gm11594-201ENSMUST00000122313 162 ntBASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms