Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 Gm24589-201ENSMUST00000116692 94 ntBASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 Gm15358-201ENSMUST00000119249 520 ntBASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc9Q8VC31 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Rps4l-201ENSMUST00000071745 943 ntBASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc9Q8VC31 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Gm8749-201ENSMUST00000117737 331 ntBASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc9Q8VC31 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 AC151895.1-201ENSMUST00000219025 1742 ntBASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 AC122314.1-201ENSMUST00000223056 2239 ntBASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms