Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nudcd3Q8R1N4 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nudcd3Q8R1N4 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Nudcd3Q8R1N4 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nudcd3Q8R1N4 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Nudcd3Q8R1N4 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Nudcd3Q8R1N4 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nudcd3Q8R1N4 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nudcd3Q8R1N4 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nudcd3Q8R1N4 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.52□□□□□ -0.24
Nudcd3Q8R1N4 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nudcd3Q8R1N4 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nudcd3Q8R1N4 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nudcd3Q8R1N4 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Nudcd3Q8R1N4 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.52□□□□□ -0.25
Nudcd3Q8R1N4 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Nudcd3Q8R1N4 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.52□□□□□ -0.25
Nudcd3Q8R1N4 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nudcd3Q8R1N4 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nudcd3Q8R1N4 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.52□□□□□ -0.25
Nudcd3Q8R1N4 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.52□□□□□ -0.25
Nudcd3Q8R1N4 Gm18049-201ENSMUST00000208909 581 ntBASIC13.52□□□□□ -0.25
Nudcd3Q8R1N4 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.52□□□□□ -0.25
Nudcd3Q8R1N4 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nudcd3Q8R1N4 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nudcd3Q8R1N4 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nudcd3Q8R1N4 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nudcd3Q8R1N4 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Nudcd3Q8R1N4 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nudcd3Q8R1N4 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nudcd3Q8R1N4 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nudcd3Q8R1N4 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nudcd3Q8R1N4 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nudcd3Q8R1N4 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nudcd3Q8R1N4 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nudcd3Q8R1N4 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Syt7-205ENSMUST00000224135 1557 ntBASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Rprl2-201ENSMUST00000157150 290 ntBASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Mzt1-203ENSMUST00000227948 952 ntBASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nudcd3Q8R1N4 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Nudcd3Q8R1N4 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nudcd3Q8R1N4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nudcd3Q8R1N4 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nudcd3Q8R1N4 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nudcd3Q8R1N4 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nudcd3Q8R1N4 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.5□□□□□ -0.25
Nudcd3Q8R1N4 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Nudcd3Q8R1N4 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Nudcd3Q8R1N4 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.5□□□□□ -0.25
Nudcd3Q8R1N4 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nudcd3Q8R1N4 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nudcd3Q8R1N4 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nudcd3Q8R1N4 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Nudcd3Q8R1N4 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Nudcd3Q8R1N4 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nudcd3Q8R1N4 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nudcd3Q8R1N4 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.5□□□□□ -0.25
Nudcd3Q8R1N4 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Nudcd3Q8R1N4 Gm13015-201ENSMUST00000118674 204 ntBASIC13.5□□□□□ -0.25
Nudcd3Q8R1N4 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.5□□□□□ -0.25
Nudcd3Q8R1N4 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms