Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cchcr1Q8K2I2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Gm4875-201ENSMUST00000118257 786 ntBASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cchcr1Q8K2I2 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cchcr1Q8K2I2 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cchcr1Q8K2I2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cchcr1Q8K2I2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cchcr1Q8K2I2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cchcr1Q8K2I2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Cchcr1Q8K2I2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cchcr1Q8K2I2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cchcr1Q8K2I2 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cchcr1Q8K2I2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Cchcr1Q8K2I2 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cchcr1Q8K2I2 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cchcr1Q8K2I2 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.01■□□□□ 0.15
Cchcr1Q8K2I2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16■□□□□ 0.15
Cchcr1Q8K2I2 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cchcr1Q8K2I2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cchcr1Q8K2I2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Cchcr1Q8K2I2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cchcr1Q8K2I2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cchcr1Q8K2I2 Gm45242-201ENSMUST00000210666 2129 ntBASIC16■□□□□ 0.15
Cchcr1Q8K2I2 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Cchcr1Q8K2I2 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cchcr1Q8K2I2 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cchcr1Q8K2I2 Gm13223-201ENSMUST00000118609 747 ntBASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms