Protein–RNA interactions for Protein: Q8K0H1

Slc47a1, Multidrug and toxin extrusion protein 1, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc47a1Q8K0H1 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Slc47a1Q8K0H1 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc47a1Q8K0H1 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.4□□□□□ -0.26
Slc47a1Q8K0H1 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Slc47a1Q8K0H1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Slc47a1Q8K0H1 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Slc47a1Q8K0H1 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Slc47a1Q8K0H1 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Slc47a1Q8K0H1 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Gm46209-201ENSMUST00000217912 553 ntBASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc47a1Q8K0H1 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc47a1Q8K0H1 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc47a1Q8K0H1 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc47a1Q8K0H1 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Slc47a1Q8K0H1 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc47a1Q8K0H1 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc47a1Q8K0H1 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc47a1Q8K0H1 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc47a1Q8K0H1 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc47a1Q8K0H1 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc47a1Q8K0H1 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc47a1Q8K0H1 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc47a1Q8K0H1 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc47a1Q8K0H1 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc47a1Q8K0H1 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc47a1Q8K0H1 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc47a1Q8K0H1 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc47a1Q8K0H1 Gm12151-201ENSMUST00000121374 290 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms