Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zc3h3Q8CHP0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zc3h3Q8CHP0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.14□□□□□ -0.31
Zc3h3Q8CHP0 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.14□□□□□ -0.31
Zc3h3Q8CHP0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Zc3h3Q8CHP0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Zc3h3Q8CHP0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Zc3h3Q8CHP0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Zc3h3Q8CHP0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Zc3h3Q8CHP0 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Gm6447-201ENSMUST00000118905 835 ntBASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Gm15547-201ENSMUST00000122152 333 ntBASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Gm25700-201ENSMUST00000177693 110 ntBASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Gm2546-201ENSMUST00000182630 991 ntBASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zc3h3Q8CHP0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Gm25214-201ENSMUST00000104573 129 ntBASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Gm11597-201ENSMUST00000121423 964 ntBASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Gm12208-201ENSMUST00000122004 163 ntBASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Gm44405-201ENSMUST00000198952 126 ntBASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zc3h3Q8CHP0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Zc3h3Q8CHP0 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.11□□□□□ -0.31
Zc3h3Q8CHP0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zc3h3Q8CHP0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zc3h3Q8CHP0 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zc3h3Q8CHP0 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zc3h3Q8CHP0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zc3h3Q8CHP0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zc3h3Q8CHP0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Zc3h3Q8CHP0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zc3h3Q8CHP0 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Zc3h3Q8CHP0 Snord83b-201ENSMUST00000104546 94 ntBASIC13.11□□□□□ -0.31
Zc3h3Q8CHP0 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zc3h3Q8CHP0 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Zc3h3Q8CHP0 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zc3h3Q8CHP0 Gm14109-201ENSMUST00000118814 309 ntBASIC13.11□□□□□ -0.31
Zc3h3Q8CHP0 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zc3h3Q8CHP0 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.11□□□□□ -0.31
Zc3h3Q8CHP0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zc3h3Q8CHP0 Gm17208-201ENSMUST00000168388 535 ntBASIC13.11□□□□□ -0.31
Zc3h3Q8CHP0 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.11□□□□□ -0.31
Zc3h3Q8CHP0 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms