Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rab11fip3Q8CHD8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rab11fip3Q8CHD8 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rab11fip3Q8CHD8 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
Rab11fip3Q8CHD8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rab11fip3Q8CHD8 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Rab11fip3Q8CHD8 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rab11fip3Q8CHD8 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rab11fip3Q8CHD8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Rab11fip3Q8CHD8 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rab11fip3Q8CHD8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rab11fip3Q8CHD8 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC17.46■□□□□ 0.39
Rab11fip3Q8CHD8 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rab11fip3Q8CHD8 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Rab11fip3Q8CHD8 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Rab11fip3Q8CHD8 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC17.46■□□□□ 0.38
Rab11fip3Q8CHD8 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Gm10339-203ENSMUST00000225409 1671 ntBASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Gm45684-201ENSMUST00000210244 1571 ntBASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Gm12846-201ENSMUST00000120431 1373 ntBASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Gm26927-201ENSMUST00000182385 965 ntBASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Gm8565-201ENSMUST00000183259 1014 ntBASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Gm27514-201ENSMUST00000183692 110 ntBASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Gm44069-201ENSMUST00000204898 506 ntBASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Gm10478-201ENSMUST00000084451 396 ntBASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab11fip3Q8CHD8 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Gm8062-201ENSMUST00000139696 444 ntBASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rab11fip3Q8CHD8 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 Dctn4-202ENSMUST00000223590 1530 ntBASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 Gm16202-201ENSMUST00000117532 544 ntBASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 Gm6447-201ENSMUST00000118905 835 ntBASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 Gm1335-201ENSMUST00000121653 386 ntBASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 Gm5370-201ENSMUST00000187187 574 ntBASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab11fip3Q8CHD8 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms