Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rdh1Q8CGV4 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rdh1Q8CGV4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rdh1Q8CGV4 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rdh1Q8CGV4 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Gm8213-201ENSMUST00000118191 441 ntBASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Gm45784-201ENSMUST00000188360 142 ntBASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rdh1Q8CGV4 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Gm14660-201ENSMUST00000119809 575 ntBASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Gm10156-201ENSMUST00000122364 462 ntBASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rdh1Q8CGV4 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.1□□□□□ -0.31
Rdh1Q8CGV4 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rdh1Q8CGV4 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rdh1Q8CGV4 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rdh1Q8CGV4 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rdh1Q8CGV4 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rdh1Q8CGV4 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Rdh1Q8CGV4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rdh1Q8CGV4 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Rdh1Q8CGV4 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rdh1Q8CGV4 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rdh1Q8CGV4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms