Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Hist3h2bbQ8CGP0 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Gm10849-201ENSMUST00000100397 618 ntBASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 AC135963.1-201ENSMUST00000211640 717 ntBASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Odf3b-204ENSMUST00000227834 930 ntBASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hist3h2bbQ8CGP0 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Gm37722-201ENSMUST00000193757 208 ntBASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hist3h2bbQ8CGP0 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms