Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Gm5566-201ENSMUST00000116118 459 ntBASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Gm20949-201ENSMUST00000206478 952 ntBASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Gm45453-201ENSMUST00000211758 853 ntBASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Gm6888-201ENSMUST00000221983 706 ntBASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc87Q8CDL9 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc87Q8CDL9 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Gm13223-201ENSMUST00000118609 747 ntBASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc87Q8CDL9 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms