Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps53Q8CCB4 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps53Q8CCB4 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps53Q8CCB4 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps53Q8CCB4 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps53Q8CCB4 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps53Q8CCB4 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps53Q8CCB4 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Vps53Q8CCB4 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.75■□□□□ 0.11
Vps53Q8CCB4 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.75■□□□□ 0.11
Vps53Q8CCB4 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Gm27701-201ENSMUST00000184498 110 ntBASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Gm18027-201ENSMUST00000218947 619 ntBASIC15.75■□□□□ 0.11
Vps53Q8CCB4 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps53Q8CCB4 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Gm43630-201ENSMUST00000201550 776 ntBASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Gm5035-201ENSMUST00000215581 927 ntBASIC15.74■□□□□ 0.11
Vps53Q8CCB4 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps53Q8CCB4 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC15.73■□□□□ 0.11
Vps53Q8CCB4 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps53Q8CCB4 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Vps53Q8CCB4 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps53Q8CCB4 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps53Q8CCB4 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps53Q8CCB4 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Vps53Q8CCB4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps53Q8CCB4 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.73■□□□□ 0.11
Vps53Q8CCB4 Gm28911-201ENSMUST00000188837 117 ntBASIC15.73■□□□□ 0.11
Vps53Q8CCB4 AY702102-202ENSMUST00000194651 1173 ntBASIC15.73■□□□□ 0.11
Vps53Q8CCB4 Gm37714-201ENSMUST00000194742 342 ntBASIC15.73■□□□□ 0.11
Vps53Q8CCB4 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Vps53Q8CCB4 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps53Q8CCB4 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps53Q8CCB4 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms