Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.13□□□□□ -0.31
SynpoQ8CC35 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SynpoQ8CC35 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SynpoQ8CC35 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SynpoQ8CC35 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SynpoQ8CC35 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SynpoQ8CC35 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SynpoQ8CC35 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.13□□□□□ -0.31
SynpoQ8CC35 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
SynpoQ8CC35 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SynpoQ8CC35 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SynpoQ8CC35 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Grk6-205ENSMUST00000224653 2976 ntBASIC13.12□□□□□ -0.31
SynpoQ8CC35 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.12□□□□□ -0.31
SynpoQ8CC35 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Gm45384-201ENSMUST00000210451 277 ntBASIC13.12□□□□□ -0.31
SynpoQ8CC35 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.12□□□□□ -0.31
SynpoQ8CC35 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.12□□□□□ -0.31
SynpoQ8CC35 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynpoQ8CC35 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.12□□□□□ -0.31
SynpoQ8CC35 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SynpoQ8CC35 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Gm14127-201ENSMUST00000117906 678 ntBASIC13.11□□□□□ -0.31
SynpoQ8CC35 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.11□□□□□ -0.31
SynpoQ8CC35 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.11□□□□□ -0.31
SynpoQ8CC35 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Gm21470-201ENSMUST00000187680 696 ntBASIC13.11□□□□□ -0.31
SynpoQ8CC35 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.11□□□□□ -0.31
SynpoQ8CC35 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Gm18187-201ENSMUST00000196476 984 ntBASIC13.11□□□□□ -0.31
SynpoQ8CC35 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Gm9908-201ENSMUST00000211534 448 ntBASIC13.11□□□□□ -0.31
SynpoQ8CC35 Gm5425-201ENSMUST00000214125 459 ntBASIC13.11□□□□□ -0.31
SynpoQ8CC35 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Gm18624-201ENSMUST00000220966 658 ntBASIC13.11□□□□□ -0.31
SynpoQ8CC35 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.11□□□□□ -0.31
SynpoQ8CC35 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SynpoQ8CC35 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms