Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa4Q8CA71 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa4Q8CA71 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Shisa4Q8CA71 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
Shisa4Q8CA71 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa4Q8CA71 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa4Q8CA71 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa4Q8CA71 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Shisa4Q8CA71 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa4Q8CA71 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa4Q8CA71 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Shisa4Q8CA71 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa4Q8CA71 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa4Q8CA71 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shisa4Q8CA71 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Shisa4Q8CA71 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Shisa4Q8CA71 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Gm12390-201ENSMUST00000117897 397 ntBASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Gm44487-201ENSMUST00000205145 325 ntBASIC15.64■□□□□ 0.09
Shisa4Q8CA71 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.64■□□□□ 0.09
Shisa4Q8CA71 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Mir3102-201ENSMUST00000175555 104 ntBASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Gm27839-201ENSMUST00000184242 106 ntBASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Gm38671-201ENSMUST00000200573 130 ntBASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Shisa4Q8CA71 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shisa4Q8CA71 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
Shisa4Q8CA71 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Shisa4Q8CA71 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shisa4Q8CA71 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.62■□□□□ 0.09
Shisa4Q8CA71 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shisa4Q8CA71 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shisa4Q8CA71 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Shisa4Q8CA71 Gm11978-201ENSMUST00000122315 466 ntBASIC15.62■□□□□ 0.09
Shisa4Q8CA71 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.62■□□□□ 0.09
Shisa4Q8CA71 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.62■□□□□ 0.09
Shisa4Q8CA71 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.62■□□□□ 0.09
Shisa4Q8CA71 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shisa4Q8CA71 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shisa4Q8CA71 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Shisa4Q8CA71 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shisa4Q8CA71 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Shisa4Q8CA71 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Shisa4Q8CA71 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms