Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Gm11803-201ENSMUST00000119966 444 ntBASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.74■□□□□ 0.11
Alx1Q8C8B0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Gm27486-201ENSMUST00000184923 80 ntBASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.73■□□□□ 0.11
Alx1Q8C8B0 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.73■□□□□ 0.11
Alx1Q8C8B0 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Alx1Q8C8B0 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Gm44069-201ENSMUST00000204898 506 ntBASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Alx1Q8C8B0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms