Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Gm2383-201ENSMUST00000181461 807 ntBASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a6Q8C6K9 Gm4909-201ENSMUST00000118749 794 ntBASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.18□□□□□ -0.46
Col6a6Q8C6K9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Gm2445-201ENSMUST00000182798 989 ntBASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms