Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC15□□□□□ -0.01
Trim47Q8C0E3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15□□□□□ -0.01
Trim47Q8C0E3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim47Q8C0E3 Gm17150-201ENSMUST00000165577 381 ntBASIC15□□□□□ -0.01
Trim47Q8C0E3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15□□□□□ -0.01
Trim47Q8C0E3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim47Q8C0E3 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim47Q8C0E3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim47Q8C0E3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim47Q8C0E3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim47Q8C0E3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim47Q8C0E3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trim47Q8C0E3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trim47Q8C0E3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim47Q8C0E3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim47Q8C0E3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim47Q8C0E3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim47Q8C0E3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim47Q8C0E3 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim47Q8C0E3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15□□□□□ -0.01
Trim47Q8C0E3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Gm26315-201ENSMUST00000083890 321 ntBASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trim47Q8C0E3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Gm17794-201ENSMUST00000220252 955 ntBASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim47Q8C0E3 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim47Q8C0E3 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Gm13612-201ENSMUST00000119276 390 ntBASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Gm27839-201ENSMUST00000184242 106 ntBASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Gm38671-201ENSMUST00000200573 130 ntBASIC14.97□□□□□ -0.01
Trim47Q8C0E3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms