Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup54Q8BTS4 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nup54Q8BTS4 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nup54Q8BTS4 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nup54Q8BTS4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup54Q8BTS4 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup54Q8BTS4 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.83□□□□□ -0.2
Nup54Q8BTS4 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup54Q8BTS4 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nup54Q8BTS4 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup54Q8BTS4 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nup54Q8BTS4 Mir1894-201ENSMUST00000122802 81 ntBASIC13.83□□□□□ -0.2
Nup54Q8BTS4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.83□□□□□ -0.2
Nup54Q8BTS4 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nup54Q8BTS4 Gm5035-201ENSMUST00000215581 927 ntBASIC13.83□□□□□ -0.2
Nup54Q8BTS4 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup54Q8BTS4 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup54Q8BTS4 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup54Q8BTS4 Gm5356-201ENSMUST00000093326 615 ntBASIC13.83□□□□□ -0.2
Nup54Q8BTS4 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nup54Q8BTS4 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Nup54Q8BTS4 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup54Q8BTS4 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.83□□□□□ -0.2
Nup54Q8BTS4 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup54Q8BTS4 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Nup54Q8BTS4 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup54Q8BTS4 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.83□□□□□ -0.2
Nup54Q8BTS4 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup54Q8BTS4 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup54Q8BTS4 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Nup54Q8BTS4 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Gm5687-201ENSMUST00000118252 640 ntBASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Gm17794-201ENSMUST00000220252 955 ntBASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Gm18473-201ENSMUST00000220543 868 ntBASIC13.82□□□□□ -0.2
Nup54Q8BTS4 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms