Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col16a1Q8BLX7 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Gm14109-201ENSMUST00000118814 309 ntBASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Gm9083-201ENSMUST00000120423 819 ntBASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Mir7221-201ENSMUST00000184009 72 ntBASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Gm18916-201ENSMUST00000198264 1246 ntBASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Gm42997-202ENSMUST00000200321 985 ntBASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col16a1Q8BLX7 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Gm8099-201ENSMUST00000200510 742 ntBASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Gm5884-201ENSMUST00000036712 1479 ntBASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Gm5846-201ENSMUST00000193146 1414 ntBASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Gm15782-201ENSMUST00000121073 445 ntBASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Gm9061-201ENSMUST00000182707 1006 ntBASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col16a1Q8BLX7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Col16a1Q8BLX7 Gm37827-201ENSMUST00000194486 1542 ntBASIC17.39■□□□□ 0.38
Col16a1Q8BLX7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Col16a1Q8BLX7 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Col16a1Q8BLX7 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC17.39■□□□□ 0.37
Col16a1Q8BLX7 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col16a1Q8BLX7 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.39■□□□□ 0.37
Col16a1Q8BLX7 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col16a1Q8BLX7 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col16a1Q8BLX7 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col16a1Q8BLX7 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC17.39■□□□□ 0.37
Col16a1Q8BLX7 Gm8546-201ENSMUST00000178288 1264 ntBASIC17.39■□□□□ 0.37
Col16a1Q8BLX7 Mir7032-201ENSMUST00000185154 79 ntBASIC17.39■□□□□ 0.37
Col16a1Q8BLX7 Gm44405-201ENSMUST00000198952 126 ntBASIC17.39■□□□□ 0.37
Col16a1Q8BLX7 Ighv8-10-201ENSMUST00000199579 358 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms