Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc40Q8BI79 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc40Q8BI79 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc40Q8BI79 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc40Q8BI79 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc40Q8BI79 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc40Q8BI79 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc40Q8BI79 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc40Q8BI79 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc40Q8BI79 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc40Q8BI79 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc40Q8BI79 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Gm44719-201ENSMUST00000206404 149 ntBASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Gm5425-201ENSMUST00000214125 459 ntBASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Gm6888-201ENSMUST00000221983 706 ntBASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc40Q8BI79 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Gm13453-201ENSMUST00000118708 357 ntBASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Gm15393-201ENSMUST00000120499 219 ntBASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Gm4804-201ENSMUST00000182234 999 ntBASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Gm27321-201ENSMUST00000185021 205 ntBASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc40Q8BI79 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc40Q8BI79 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc40Q8BI79 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc40Q8BI79 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms