Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 Gm27989-201ENSMUST00000184721 107 ntBASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Gm27838-201ENSMUST00000184829 128 ntBASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn3Q8BHH8 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Gm13385-201ENSMUST00000121089 220 ntBASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn3Q8BHH8 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms