Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim6Q8BGE7 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.39□□□□□ -0.11
Trim6Q8BGE7 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Gm10175-201ENSMUST00000086013 645 ntBASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim6Q8BGE7 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Gm11779-201ENSMUST00000118541 368 ntBASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Gm9824-201ENSMUST00000178707 561 ntBASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Gm6443-201ENSMUST00000203599 874 ntBASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim6Q8BGE7 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim6Q8BGE7 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim6Q8BGE7 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim6Q8BGE7 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim6Q8BGE7 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim6Q8BGE7 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim6Q8BGE7 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim6Q8BGE7 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim6Q8BGE7 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim6Q8BGE7 Gm13015-201ENSMUST00000118674 204 ntBASIC14.36□□□□□ -0.11
Trim6Q8BGE7 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim6Q8BGE7 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim6Q8BGE7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
Trim6Q8BGE7 Gm27494-201ENSMUST00000184735 189 ntBASIC14.36□□□□□ -0.11
Trim6Q8BGE7 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim6Q8BGE7 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.36□□□□□ -0.11
Trim6Q8BGE7 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim6Q8BGE7 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim6Q8BGE7 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim6Q8BGE7 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim6Q8BGE7 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim6Q8BGE7 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim6Q8BGE7 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim6Q8BGE7 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms