Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Gm5354-201ENSMUST00000182417 973 ntBASIC13.38□□□□□ -0.27
Ubp1Q811S7 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC13.38□□□□□ -0.27
Ubp1Q811S7 Gm27772-201ENSMUST00000184900 187 ntBASIC13.38□□□□□ -0.27
Ubp1Q811S7 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.38□□□□□ -0.27
Ubp1Q811S7 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ubp1Q811S7 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.38□□□□□ -0.27
Ubp1Q811S7 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.38□□□□□ -0.27
Ubp1Q811S7 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.38□□□□□ -0.27
Ubp1Q811S7 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.37□□□□□ -0.27
Ubp1Q811S7 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Gm37917-201ENSMUST00000194711 392 ntBASIC13.37□□□□□ -0.27
Ubp1Q811S7 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubp1Q811S7 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ubp1Q811S7 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.36□□□□□ -0.27
Ubp1Q811S7 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.36□□□□□ -0.27
Ubp1Q811S7 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Gm19220-201ENSMUST00000222682 803 ntBASIC13.36□□□□□ -0.27
Ubp1Q811S7 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.36□□□□□ -0.27
Ubp1Q811S7 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.36□□□□□ -0.27
Ubp1Q811S7 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubp1Q811S7 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Ubp1Q811S7 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms