Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trnp1Q80ZI1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 AA914427-201ENSMUST00000193194 1166 ntBASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trnp1Q80ZI1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Gm11531-201ENSMUST00000117614 555 ntBASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Gm22334-201ENSMUST00000158070 133 ntBASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 AC167669.2-201ENSMUST00000224417 1620 ntBASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Trnp1Q80ZI1 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Gm12201-201ENSMUST00000120657 1234 ntBASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Gm13665-201ENSMUST00000120830 528 ntBASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Gm11978-201ENSMUST00000122315 466 ntBASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Gm5950-201ENSMUST00000213337 772 ntBASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Gm29787-201ENSMUST00000222129 849 ntBASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms