Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Gm7584-201ENSMUST00000175829 940 ntBASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf38bQ80SY5 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Gm15460-201ENSMUST00000118147 391 ntBASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Gm44364-201ENSMUST00000198368 141 ntBASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Gm6916-202ENSMUST00000205523 195 ntBASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Nsd1-205ENSMUST00000224693 852 ntBASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf38bQ80SY5 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Gm15808-201ENSMUST00000119046 604 ntBASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Mir7070-201ENSMUST00000183657 86 ntBASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Gm2594-201ENSMUST00000214774 742 ntBASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms