Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.19□□□□□ -0.3
Scn4bQ7M729 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.19□□□□□ -0.3
Scn4bQ7M729 Gm25925-201ENSMUST00000158314 306 ntBASIC13.19□□□□□ -0.3
Scn4bQ7M729 Gm21854-201ENSMUST00000179901 471 ntBASIC13.19□□□□□ -0.3
Scn4bQ7M729 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn4bQ7M729 Gm27772-201ENSMUST00000184900 187 ntBASIC13.19□□□□□ -0.3
Scn4bQ7M729 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.19□□□□□ -0.3
Scn4bQ7M729 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.19□□□□□ -0.3
Scn4bQ7M729 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.19□□□□□ -0.3
Scn4bQ7M729 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn4bQ7M729 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Scn4bQ7M729 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn4bQ7M729 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn4bQ7M729 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn4bQ7M729 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn4bQ7M729 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Scn4bQ7M729 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.19□□□□□ -0.3
Scn4bQ7M729 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn4bQ7M729 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn4bQ7M729 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn4bQ7M729 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn4bQ7M729 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn4bQ7M729 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn4bQ7M729 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn4bQ7M729 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn4bQ7M729 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn4bQ7M729 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.18□□□□□ -0.3
Scn4bQ7M729 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.18□□□□□ -0.3
Scn4bQ7M729 Syt7-204ENSMUST00000223586 1344 ntBASIC13.18□□□□□ -0.3
Scn4bQ7M729 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.18□□□□□ -0.3
Scn4bQ7M729 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.18□□□□□ -0.3
Scn4bQ7M729 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.18□□□□□ -0.3
Scn4bQ7M729 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Gm24694-201ENSMUST00000180054 110 ntBASIC13.18□□□□□ -0.3
Scn4bQ7M729 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Gm27663-201ENSMUST00000184839 110 ntBASIC13.18□□□□□ -0.3
Scn4bQ7M729 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.18□□□□□ -0.3
Scn4bQ7M729 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.18□□□□□ -0.3
Scn4bQ7M729 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn4bQ7M729 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn4bQ7M729 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.17□□□□□ -0.3
Scn4bQ7M729 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.17□□□□□ -0.3
Scn4bQ7M729 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.17□□□□□ -0.3
Scn4bQ7M729 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.17□□□□□ -0.3
Scn4bQ7M729 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Gm9797-201ENSMUST00000052902 613 ntBASIC13.17□□□□□ -0.3
Scn4bQ7M729 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.17□□□□□ -0.3
Scn4bQ7M729 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn4bQ7M729 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms