Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Gm29667-201ENSMUST00000190817 490 ntBASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sp140Q6NSQ5 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sp140Q6NSQ5 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Gm21854-201ENSMUST00000179901 471 ntBASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms