Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Daam2-202ENSMUST00000224595 1926 ntBASIC12.4□□□□□ -0.42
VcanQ62059 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcanQ62059 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcanQ62059 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.4□□□□□ -0.42
VcanQ62059 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
VcanQ62059 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
VcanQ62059 Mir1901-201ENSMUST00000122616 78 ntBASIC12.39□□□□□ -0.43
VcanQ62059 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VcanQ62059 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VcanQ62059 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.39□□□□□ -0.43
VcanQ62059 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.39□□□□□ -0.43
VcanQ62059 Gm9996-201ENSMUST00000070359 913 ntBASIC12.39□□□□□ -0.43
VcanQ62059 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
VcanQ62059 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.39□□□□□ -0.43
VcanQ62059 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
VcanQ62059 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.39□□□□□ -0.43
VcanQ62059 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VcanQ62059 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VcanQ62059 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VcanQ62059 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
VcanQ62059 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VcanQ62059 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
VcanQ62059 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
VcanQ62059 Gm15515-201ENSMUST00000117827 822 ntBASIC12.39□□□□□ -0.43
VcanQ62059 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VcanQ62059 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.39□□□□□ -0.43
VcanQ62059 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
VcanQ62059 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VcanQ62059 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.39□□□□□ -0.43
VcanQ62059 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VcanQ62059 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.39□□□□□ -0.43
VcanQ62059 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
VcanQ62059 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VcanQ62059 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.39□□□□□ -0.43
VcanQ62059 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.39□□□□□ -0.43
VcanQ62059 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VcanQ62059 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
VcanQ62059 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
VcanQ62059 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.39□□□□□ -0.43
VcanQ62059 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VcanQ62059 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VcanQ62059 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VcanQ62059 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VcanQ62059 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VcanQ62059 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
VcanQ62059 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.38□□□□□ -0.43
VcanQ62059 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
VcanQ62059 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VcanQ62059 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VcanQ62059 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.38□□□□□ -0.43
VcanQ62059 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VcanQ62059 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.38□□□□□ -0.43
VcanQ62059 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VcanQ62059 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VcanQ62059 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VcanQ62059 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VcanQ62059 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
VcanQ62059 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
VcanQ62059 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VcanQ62059 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VcanQ62059 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
VcanQ62059 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VcanQ62059 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.38□□□□□ -0.43
VcanQ62059 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.38□□□□□ -0.43
VcanQ62059 Gm3096-201ENSMUST00000185770 364 ntBASIC12.38□□□□□ -0.43
VcanQ62059 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.38□□□□□ -0.43
VcanQ62059 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.38□□□□□ -0.43
VcanQ62059 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
VcanQ62059 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VcanQ62059 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
VcanQ62059 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
VcanQ62059 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VcanQ62059 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.38□□□□□ -0.43
VcanQ62059 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VcanQ62059 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VcanQ62059 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
VcanQ62059 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
VcanQ62059 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.38□□□□□ -0.43
VcanQ62059 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
VcanQ62059 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VcanQ62059 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.38□□□□□ -0.43
VcanQ62059 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.38□□□□□ -0.43
VcanQ62059 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VcanQ62059 Gm8913-201ENSMUST00000209491 641 ntBASIC12.38□□□□□ -0.43
VcanQ62059 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VcanQ62059 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VcanQ62059 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VcanQ62059 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VcanQ62059 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VcanQ62059 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.37□□□□□ -0.43
VcanQ62059 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VcanQ62059 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VcanQ62059 Gm4862-201ENSMUST00000170405 438 ntBASIC12.37□□□□□ -0.43
VcanQ62059 Gm37028-201ENSMUST00000194276 107 ntBASIC12.37□□□□□ -0.43
VcanQ62059 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VcanQ62059 Mir497b-201ENSMUST00000093601 125 ntBASIC12.37□□□□□ -0.43
VcanQ62059 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VcanQ62059 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VcanQ62059 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.37□□□□□ -0.43
VcanQ62059 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms