Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim38Q5SZ99 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim38Q5SZ99 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim38Q5SZ99 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim38Q5SZ99 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim38Q5SZ99 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim38Q5SZ99 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim38Q5SZ99 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trim38Q5SZ99 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim38Q5SZ99 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trim38Q5SZ99 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trim38Q5SZ99 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Gm15487-201ENSMUST00000122373 465 ntBASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Gm21854-201ENSMUST00000179901 471 ntBASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.04□□□□□ -0.16
Trim38Q5SZ99 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim38Q5SZ99 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Gm12151-201ENSMUST00000121374 290 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms