Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim40Q3UWA4 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trim40Q3UWA4 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim40Q3UWA4 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim40Q3UWA4 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim40Q3UWA4 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim40Q3UWA4 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.68□□□□□ -0.38
Trim40Q3UWA4 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim40Q3UWA4 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim40Q3UWA4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.68□□□□□ -0.38
Trim40Q3UWA4 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.68□□□□□ -0.38
Trim40Q3UWA4 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.68□□□□□ -0.38
Trim40Q3UWA4 Gm17271-201ENSMUST00000165535 355 ntBASIC12.68□□□□□ -0.38
Trim40Q3UWA4 Gm18737-201ENSMUST00000173594 937 ntBASIC12.68□□□□□ -0.38
Trim40Q3UWA4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.68□□□□□ -0.38
Trim40Q3UWA4 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim40Q3UWA4 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim40Q3UWA4 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim40Q3UWA4 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim40Q3UWA4 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim40Q3UWA4 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim40Q3UWA4 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim40Q3UWA4 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim40Q3UWA4 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim40Q3UWA4 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim40Q3UWA4 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Trim40Q3UWA4 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim40Q3UWA4 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim40Q3UWA4 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Gm6973-201ENSMUST00000117080 721 ntBASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Gm15427-201ENSMUST00000117288 531 ntBASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Gm1401-201ENSMUST00000122048 772 ntBASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim40Q3UWA4 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.66□□□□□ -0.38
Trim40Q3UWA4 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Gm5364-201ENSMUST00000216789 889 ntBASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim40Q3UWA4 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms