Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Gm10013-201ENSMUST00000106074 672 ntBASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Gm5763-201ENSMUST00000155951 1530 ntBASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Gm9347-201ENSMUST00000211473 1607 ntBASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC9.69□□□□□ -0.86
Cks1brtQ3UNC9 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Gm15794-201ENSMUST00000120182 631 ntBASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Gm27646-201ENSMUST00000183989 110 ntBASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Gm7977-201ENSMUST00000193787 748 ntBASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Gm6296-201ENSMUST00000222599 943 ntBASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Gm18263-201ENSMUST00000220846 1928 ntBASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1brtQ3UNC9 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 AC164565.1-201ENSMUST00000217520 1484 ntBASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms