Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vars2Q3U2A8 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vars2Q3U2A8 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vars2Q3U2A8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Vars2Q3U2A8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.59■□□□□ 0.25
Vars2Q3U2A8 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Vars2Q3U2A8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vars2Q3U2A8 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC16.59■□□□□ 0.25
Vars2Q3U2A8 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vars2Q3U2A8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.59■□□□□ 0.25
Vars2Q3U2A8 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vars2Q3U2A8 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vars2Q3U2A8 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vars2Q3U2A8 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.58■□□□□ 0.25
Vars2Q3U2A8 Daam2-202ENSMUST00000224595 1926 ntBASIC16.58■□□□□ 0.25
Vars2Q3U2A8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Vars2Q3U2A8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vars2Q3U2A8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Vars2Q3U2A8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vars2Q3U2A8 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vars2Q3U2A8 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Vars2Q3U2A8 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC16.58■□□□□ 0.24
Vars2Q3U2A8 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vars2Q3U2A8 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vars2Q3U2A8 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC16.58■□□□□ 0.24
Vars2Q3U2A8 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Vars2Q3U2A8 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC16.58■□□□□ 0.24
Vars2Q3U2A8 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC16.58■□□□□ 0.24
Vars2Q3U2A8 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vars2Q3U2A8 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC16.58■□□□□ 0.24
Vars2Q3U2A8 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Vars2Q3U2A8 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vars2Q3U2A8 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vars2Q3U2A8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vars2Q3U2A8 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vars2Q3U2A8 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vars2Q3U2A8 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vars2Q3U2A8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vars2Q3U2A8 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vars2Q3U2A8 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
Vars2Q3U2A8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vars2Q3U2A8 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vars2Q3U2A8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vars2Q3U2A8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vars2Q3U2A8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Gm44999-201ENSMUST00000207456 1493 ntBASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Gm16397-201ENSMUST00000122201 494 ntBASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Rprl1-202ENSMUST00000198476 238 ntBASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Ntng1-201ENSMUST00000051253 327 ntBASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vars2Q3U2A8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Vars2Q3U2A8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vars2Q3U2A8 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vars2Q3U2A8 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vars2Q3U2A8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Vars2Q3U2A8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vars2Q3U2A8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Vars2Q3U2A8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vars2Q3U2A8 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.56■□□□□ 0.24
Vars2Q3U2A8 Gm4864-201ENSMUST00000219894 1461 ntBASIC16.56■□□□□ 0.24
Vars2Q3U2A8 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vars2Q3U2A8 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vars2Q3U2A8 Gm7789-202ENSMUST00000211273 1400 ntBASIC16.56■□□□□ 0.24
Vars2Q3U2A8 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Vars2Q3U2A8 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Vars2Q3U2A8 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC16.56■□□□□ 0.24
Vars2Q3U2A8 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vars2Q3U2A8 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vars2Q3U2A8 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms