Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Treml4Q3LRV9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Treml4Q3LRV9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.74□□□□□ -0.37
Treml4Q3LRV9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Treml4Q3LRV9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Treml4Q3LRV9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Treml4Q3LRV9 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Grk6-205ENSMUST00000224653 2976 ntBASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Gm13689-201ENSMUST00000119360 685 ntBASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Gm3961-201ENSMUST00000204425 994 ntBASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.73□□□□□ -0.37
Treml4Q3LRV9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Treml4Q3LRV9 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Treml4Q3LRV9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Treml4Q3LRV9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Treml4Q3LRV9 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Treml4Q3LRV9 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Treml4Q3LRV9 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Treml4Q3LRV9 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms