Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Chd8Q09XV5 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Gm16305-201ENSMUST00000140747 556 ntBASIC11.99□□□□□ -0.49
Chd8Q09XV5 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Gm7985-201ENSMUST00000183329 981 ntBASIC11.99□□□□□ -0.49
Chd8Q09XV5 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC11.98□□□□□ -0.49
Chd8Q09XV5 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Chd8Q09XV5 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.98□□□□□ -0.49
Chd8Q09XV5 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.98□□□□□ -0.49
Chd8Q09XV5 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.98□□□□□ -0.49
Chd8Q09XV5 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Gm23771-201ENSMUST00000178702 110 ntBASIC11.98□□□□□ -0.49
Chd8Q09XV5 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.98□□□□□ -0.49
Chd8Q09XV5 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Gm45398-201ENSMUST00000210561 165 ntBASIC11.98□□□□□ -0.49
Chd8Q09XV5 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.98□□□□□ -0.49
Chd8Q09XV5 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chd8Q09XV5 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.98□□□□□ -0.49
Chd8Q09XV5 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Gm14585-201ENSMUST00000120713 634 ntBASIC11.97□□□□□ -0.49
Chd8Q09XV5 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms