Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Atf4Q06507 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Atf4Q06507 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Atf4Q06507 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
Atf4Q06507 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Atf4Q06507 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atf4Q06507 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atf4Q06507 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atf4Q06507 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Atf4Q06507 Gm43435-201ENSMUST00000199996 1438 ntBASIC13.06□□□□□ -0.32
Atf4Q06507 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.06□□□□□ -0.32
Atf4Q06507 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atf4Q06507 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Atf4Q06507 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atf4Q06507 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Atf4Q06507 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atf4Q06507 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Atf4Q06507 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.06□□□□□ -0.32
Atf4Q06507 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Atf4Q06507 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atf4Q06507 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.06□□□□□ -0.32
Atf4Q06507 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.06□□□□□ -0.32
Atf4Q06507 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Atf4Q06507 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.06□□□□□ -0.32
Atf4Q06507 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Atf4Q06507 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atf4Q06507 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Atf4Q06507 Gm23673-201ENSMUST00000157474 298 ntBASIC13.06□□□□□ -0.32
Atf4Q06507 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Atf4Q06507 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.06□□□□□ -0.32
Atf4Q06507 AA619741-201ENSMUST00000195095 646 ntBASIC13.06□□□□□ -0.32
Atf4Q06507 Gm2451-201ENSMUST00000199447 999 ntBASIC13.06□□□□□ -0.32
Atf4Q06507 Gm10290-201ENSMUST00000200451 999 ntBASIC13.06□□□□□ -0.32
Atf4Q06507 Gm43553-201ENSMUST00000200900 685 ntBASIC13.06□□□□□ -0.32
Atf4Q06507 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.06□□□□□ -0.32
Atf4Q06507 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Atf4Q06507 Mir125a-201ENSMUST00000083545 68 ntBASIC13.06□□□□□ -0.32
Atf4Q06507 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atf4Q06507 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.06□□□□□ -0.32
Atf4Q06507 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.06□□□□□ -0.32
Atf4Q06507 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.06□□□□□ -0.32
Atf4Q06507 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atf4Q06507 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atf4Q06507 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atf4Q06507 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Atf4Q06507 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atf4Q06507 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atf4Q06507 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atf4Q06507 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atf4Q06507 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atf4Q06507 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atf4Q06507 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atf4Q06507 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atf4Q06507 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Atf4Q06507 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atf4Q06507 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atf4Q06507 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Atf4Q06507 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atf4Q06507 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Atf4Q06507 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.05□□□□□ -0.32
Atf4Q06507 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Atf4Q06507 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atf4Q06507 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Atf4Q06507 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atf4Q06507 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atf4Q06507 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Atf4Q06507 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Atf4Q06507 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atf4Q06507 Gm12341-201ENSMUST00000119724 503 ntBASIC13.05□□□□□ -0.32
Atf4Q06507 Gm24380-201ENSMUST00000122696 324 ntBASIC13.05□□□□□ -0.32
Atf4Q06507 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Atf4Q06507 Gm8185-201ENSMUST00000160999 669 ntBASIC13.05□□□□□ -0.32
Atf4Q06507 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atf4Q06507 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.05□□□□□ -0.32
Atf4Q06507 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Atf4Q06507 Gm27892-201ENSMUST00000185017 106 ntBASIC13.05□□□□□ -0.32
Atf4Q06507 Mir7654-201ENSMUST00000185082 70 ntBASIC13.05□□□□□ -0.32
Atf4Q06507 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC13.05□□□□□ -0.32
Atf4Q06507 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.05□□□□□ -0.32
Atf4Q06507 AC132384.6-201ENSMUST00000218976 1206 ntBASIC13.05□□□□□ -0.32
Atf4Q06507 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Atf4Q06507 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.05□□□□□ -0.32
Atf4Q06507 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atf4Q06507 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Atf4Q06507 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Atf4Q06507 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Atf4Q06507 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms