Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.89□□□□□ -0.51
Thbs3Q05895 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.89□□□□□ -0.51
Thbs3Q05895 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.89□□□□□ -0.51
Thbs3Q05895 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.89□□□□□ -0.51
Thbs3Q05895 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 Gm2423-201ENSMUST00000074863 733 ntBASIC11.89□□□□□ -0.51
Thbs3Q05895 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Thbs3Q05895 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.89□□□□□ -0.51
Thbs3Q05895 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.89□□□□□ -0.51
Thbs3Q05895 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Thbs3Q05895 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Thbs3Q05895 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Thbs3Q05895 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.89□□□□□ -0.51
Thbs3Q05895 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Thbs3Q05895 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.88□□□□□ -0.51
Thbs3Q05895 Gm15376-201ENSMUST00000122258 783 ntBASIC11.88□□□□□ -0.51
Thbs3Q05895 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.88□□□□□ -0.51
Thbs3Q05895 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.88□□□□□ -0.51
Thbs3Q05895 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.88□□□□□ -0.51
Thbs3Q05895 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Thbs3Q05895 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Thbs3Q05895 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.88□□□□□ -0.51
Thbs3Q05895 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.88□□□□□ -0.51
Thbs3Q05895 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.88□□□□□ -0.51
Thbs3Q05895 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.88□□□□□ -0.51
Thbs3Q05895 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Thbs3Q05895 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.88□□□□□ -0.51
Thbs3Q05895 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Thbs3Q05895 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Thbs3Q05895 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.88□□□□□ -0.51
Thbs3Q05895 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.87□□□□□ -0.51
Thbs3Q05895 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs3Q05895 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs3Q05895 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Thbs3Q05895 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Thbs3Q05895 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs3Q05895 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs3Q05895 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs3Q05895 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs3Q05895 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Thbs3Q05895 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs3Q05895 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs3Q05895 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs3Q05895 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs3Q05895 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs3Q05895 Gm12859-201ENSMUST00000117834 427 ntBASIC11.87□□□□□ -0.51
Thbs3Q05895 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs3Q05895 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.87□□□□□ -0.51
Thbs3Q05895 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Thbs3Q05895 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs3Q05895 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.87□□□□□ -0.51
Thbs3Q05895 Gm38144-201ENSMUST00000192790 465 ntBASIC11.87□□□□□ -0.51
Thbs3Q05895 Gm37917-201ENSMUST00000194711 392 ntBASIC11.87□□□□□ -0.51
Thbs3Q05895 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.87□□□□□ -0.51
Thbs3Q05895 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.87□□□□□ -0.51
Thbs3Q05895 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms